STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
plekhm3Uncharacterized protein. (743 aa)    
Predicted Functional Partners:
ENSCMIP00000018522
RUN domain-containing protein.
 
  
   0.901
dagla
Lipase_3 domain-containing protein.
      
 0.631
ccnyl1
Cyclin-Y-like protein 1-B; Belongs to the cyclin family.
      
 0.610
ccny
CYCLIN domain-containing protein; Belongs to the cyclin family.
      
 0.610
c1qbp
Uncharacterized protein.
      
 0.594
lrrcc1
Uncharacterized protein.
      
 0.589
klf7
Uncharacterized protein.
      
 0.589
ENSCMIP00000020164
Uncharacterized protein.
   
  
 0.487
Ttll6
Uncharacterized protein.
   
  
 0.487
ostm1
Uncharacterized protein.
   
  
 0.486
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.