Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arsaSulfatase domain-containing protein. (503 aa)    
Predicted Functional Partners:
galc
Glyco_hydro_59M domain-containing protein.
     
 0.969
arsb
Sulfatase domain-containing protein.
  
0.963
arsg
Sulfatase domain-containing protein.
  
  
0.956
galns
Sulfatase domain-containing protein.
  
0.952
sumf1
FGE-sulfatase domain-containing protein.
  
 0.945
LOC103187293
Sialidase domain-containing protein.
  
 0.940
LOC103182142
Sialidase domain-containing protein.
  
 0.932
gal3st1
Uncharacterized protein.
     
 0.925
glb1
Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.
  
 0.925
b4galt6
Uncharacterized protein.
     
 0.923
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.