STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsaSulfatase domain-containing protein. (503 aa)    
Predicted Functional Partners:
arsb
Sulfatase domain-containing protein.
  
0.956
galc
Glyco_hydro_59M domain-containing protein.
     
 0.953
arsg
Sulfatase domain-containing protein.
  
  
 
0.951
LOC103182142
Sialidase domain-containing protein.
  
 0.929
LOC103187293
Sialidase domain-containing protein.
  
 0.926
LOC103181594
UDP-glucuronosyltransferase; Belongs to the UDP-glycosyltransferase family.
     
 0.908
LOC103188741
2-hydroxyacylsphingosine 1-beta-galactosyltransferase-like protein; Belongs to the UDP-glycosyltransferase family.
     
 0.908
sumf1
FGE-sulfatase domain-containing protein.
  
 0.860
sumf2
FGE-sulfatase domain-containing protein.
  
 0.768
med14
Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 
 0.752
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.