Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000009739BTB domain-containing protein. (397 aa)    
Predicted Functional Partners:
LOC103173168
Uncharacterized protein.
 
      0.900
LOC103173158
Uncharacterized protein.
 
      0.639
runx1t1
Uncharacterized protein.
    
 
 0.629
ENSCMIP00000002170
Uncharacterized protein.
 
      0.625
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
      
 0.610
ENSCMIP00000020353
Uncharacterized protein.
    
 0.603
LOC103190117
Synaptonemal complex protein 3.
    
 
 0.602
grin3a
Uncharacterized protein.
      
 0.600
ncor1
Uncharacterized protein.
    
 0.577
ENSCMIP00000033330
Uncharacterized protein.
    
 0.577
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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