STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000009739BTB domain-containing protein. (397 aa)    
Predicted Functional Partners:
LOC103173168
Uncharacterized protein.
 
      0.900
LOC103173158
Uncharacterized protein.
 
      0.639
ENSCMIP00000002170
Uncharacterized protein.
 
      0.625
LOC103173986
Uncharacterized protein.
 
      0.572
ENSCMIP00000001271
Uncharacterized protein.
 
      0.502
ENSCMIP00000020844
Uncharacterized protein.
 
      0.492
ENSCMIP00000002058
Uncharacterized protein.
 
      0.470
ENSCMIP00000033479
Uncharacterized protein.
 
      0.470
cul3
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.460
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
      
 0.422
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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