Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc25a17Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (295 aa)    
Predicted Functional Partners:
LOC103178738
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
 
0.901
pex11g
Uncharacterized protein.
   
 0.792
pex16
Peroxisomal membrane protein PEX16.
   
 
 0.740
pex11a
Uncharacterized protein.
   
 0.712
ENSCMIP00000040893
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.700
pex13
SH3 domain-containing protein.
   
 
 0.685
abcd3
Uncharacterized protein.
   
 
 0.660
atad1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.642
pex14
Pex14_N domain-containing protein.
     
 0.638
ENSCMIP00000003661
ABC transmembrane type-1 domain-containing protein.
   
 
 0.629
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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