Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSCMIP00000009757TGF_BETA_2 domain-containing protein. (339 aa)    
Predicted Functional Partners:
ENSCMIP00000030650
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.961
bmpr1b
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.958
amh
TGF_BETA_2 domain-containing protein.
      
 0.906
figla
BHLH domain-containing protein.
   
  
 0.888
ptgs2
EGF-like domain-containing protein.
      
 0.792
fshb
Follicle stimulating hormone beta subunit.
     
 0.721
ghsr
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.713
LOC103186779
Uncharacterized protein.
      
 0.689
ENSCMIP00000020353
Uncharacterized protein.
      
 0.677
mos
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.664
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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