pick1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

pick1

AH domain-containing protein. (373 aa)

Predicted Functional Partners:

gria2

0.954

tspan7

0.917

grip1

0.861

grip2

0.826

nsf

0.783

lnx2

0.754

gria1

0.742

gria3

0.742

gria4

0.742

tspan6

0.669

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gria1	gria2	ENSCMIP00000012306	ENSCMIP00000021700	Uncharacterized protein.	Uncharacterized protein.	0.891
gria1	grip1	ENSCMIP00000012306	ENSCMIP00000024185	Uncharacterized protein.	Uncharacterized protein.	0.774
gria1	grip2	ENSCMIP00000012306	ENSCMIP00000049304	Uncharacterized protein.	Uncharacterized protein.	0.557
gria1	nsf	ENSCMIP00000012306	ENSCMIP00000019776	Uncharacterized protein.	Uncharacterized protein.	0.631
gria1	pick1	ENSCMIP00000012306	ENSCMIP00000009868	Uncharacterized protein.	AH domain-containing protein.	0.742
gria2	gria1	ENSCMIP00000021700	ENSCMIP00000012306	Uncharacterized protein.	Uncharacterized protein.	0.891
gria2	gria3	ENSCMIP00000021700	ENSCMIP00000038576	Uncharacterized protein.	Uncharacterized protein.	0.889
gria2	gria4	ENSCMIP00000021700	ENSCMIP00000041115	Uncharacterized protein.	Uncharacterized protein.	0.888
gria2	grip1	ENSCMIP00000021700	ENSCMIP00000024185	Uncharacterized protein.	Uncharacterized protein.	0.976
gria2	grip2	ENSCMIP00000021700	ENSCMIP00000049304	Uncharacterized protein.	Uncharacterized protein.	0.823
gria2	nsf	ENSCMIP00000021700	ENSCMIP00000019776	Uncharacterized protein.	Uncharacterized protein.	0.806
gria2	pick1	ENSCMIP00000021700	ENSCMIP00000009868	Uncharacterized protein.	AH domain-containing protein.	0.954
gria2	tspan7	ENSCMIP00000021700	ENSCMIP00000024239	Uncharacterized protein.	Tetraspanin.	0.533
gria3	gria2	ENSCMIP00000038576	ENSCMIP00000021700	Uncharacterized protein.	Uncharacterized protein.	0.889
gria3	grip1	ENSCMIP00000038576	ENSCMIP00000024185	Uncharacterized protein.	Uncharacterized protein.	0.774
gria3	grip2	ENSCMIP00000038576	ENSCMIP00000049304	Uncharacterized protein.	Uncharacterized protein.	0.557
gria3	nsf	ENSCMIP00000038576	ENSCMIP00000019776	Uncharacterized protein.	Uncharacterized protein.	0.631
gria3	pick1	ENSCMIP00000038576	ENSCMIP00000009868	Uncharacterized protein.	AH domain-containing protein.	0.742
gria4	gria2	ENSCMIP00000041115	ENSCMIP00000021700	Uncharacterized protein.	Uncharacterized protein.	0.888
gria4	grip1	ENSCMIP00000041115	ENSCMIP00000024185	Uncharacterized protein.	Uncharacterized protein.	0.774