mtpap protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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Textmining

[Homology]

Score

mtpap

Uncharacterized protein. (546 aa)

Predicted Functional Partners:

lrpprc

0.737

slirp

0.733

grsf1

0.730

polrmt

0.704

supv3l1

0.568

pnpt1

0.563

mavs

0.523

mterf1

0.520

calcoco2

0.518

bicc1

0.507

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
bicc1	mtpap	ENSCMIP00000047513	ENSCMIP00000009886	SAM domain-containing protein.	Uncharacterized protein.	0.507
calcoco2	mtpap	ENSCMIP00000037603	ENSCMIP00000009886	Uncharacterized protein.	Uncharacterized protein.	0.518
grsf1	lrpprc	ENSCMIP00000040560	ENSCMIP00000009101	Uncharacterized protein.	Uncharacterized protein.	0.698
grsf1	mterf1	ENSCMIP00000040560	ENSCMIP00000044515	Uncharacterized protein.	Uncharacterized protein.	0.531
grsf1	mtpap	ENSCMIP00000040560	ENSCMIP00000009886	Uncharacterized protein.	Uncharacterized protein.	0.730
grsf1	polrmt	ENSCMIP00000040560	ENSCMIP00000014229	Uncharacterized protein.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.607
grsf1	slirp	ENSCMIP00000040560	ENSCMIP00000039507	Uncharacterized protein.	SRA stem-loop-interacting RNA-binding protein, mitochondrial-like protein.	0.614
grsf1	supv3l1	ENSCMIP00000040560	ENSCMIP00000045410	Uncharacterized protein.	Uncharacterized protein.	0.451
lrpprc	grsf1	ENSCMIP00000009101	ENSCMIP00000040560	Uncharacterized protein.	Uncharacterized protein.	0.698
lrpprc	mterf1	ENSCMIP00000009101	ENSCMIP00000044515	Uncharacterized protein.	Uncharacterized protein.	0.451
lrpprc	mtpap	ENSCMIP00000009101	ENSCMIP00000009886	Uncharacterized protein.	Uncharacterized protein.	0.737
lrpprc	pnpt1	ENSCMIP00000009101	ENSCMIP00000005712	Uncharacterized protein.	S1 motif domain-containing protein.	0.518
lrpprc	polrmt	ENSCMIP00000009101	ENSCMIP00000014229	Uncharacterized protein.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.736
lrpprc	slirp	ENSCMIP00000009101	ENSCMIP00000039507	Uncharacterized protein.	SRA stem-loop-interacting RNA-binding protein, mitochondrial-like protein.	0.977
lrpprc	supv3l1	ENSCMIP00000009101	ENSCMIP00000045410	Uncharacterized protein.	Uncharacterized protein.	0.410
mavs	mtpap	ENSCMIP00000029223	ENSCMIP00000009886	CARD_2 domain-containing protein.	Uncharacterized protein.	0.523
mterf1	grsf1	ENSCMIP00000044515	ENSCMIP00000040560	Uncharacterized protein.	Uncharacterized protein.	0.531
mterf1	lrpprc	ENSCMIP00000044515	ENSCMIP00000009101	Uncharacterized protein.	Uncharacterized protein.	0.451
mterf1	mtpap	ENSCMIP00000044515	ENSCMIP00000009886	Uncharacterized protein.	Uncharacterized protein.	0.520
mterf1	polrmt	ENSCMIP00000044515	ENSCMIP00000014229	Uncharacterized protein.	DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.	0.700