Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC103190185IRF tryptophan pentad repeat domain-containing protein. (489 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor.
    
 0.627
myd88
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.614
crebbp
Uncharacterized protein.
    
 0.613
irf1
Interferon regulatory factor.
   
 0.602
grhl3
CP2 domain-containing protein.
      
 0.590
rad51d
RECA_2 domain-containing protein.
      
 0.585
il10
Uncharacterized protein.
   
 
 0.540
fst
Follistatin.
     
 0.512
Tnip1
CC2-LZ domain-containing protein.
  
   
 0.504
hpd
4-hydroxyphenylpyruvate dioxygenase.
      
 0.500
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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