Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
c1qtnf5Complement C1q tumor necrosis factor-related protein 5. (245 aa)    
Predicted Functional Partners:
LOC103183269
Complement C1q tumor necrosis factor-related protein 9B-like protein.
   
   0.848
dhfr
DHFR domain-containing protein.
      
 0.676
fam98b
Uncharacterized protein.
      
 0.659
gosr1
Uncharacterized protein.
      
 0.658
scarf1
Uncharacterized protein.
      
 0.649
cryba1
Uncharacterized protein; Belongs to the beta/gamma-crystallin family.
      
 0.641
LOC103171936
RH2 domain-containing protein.
      
 0.606
prpf8
MPN domain-containing protein.
      
 0.594
chchd2
Coiled-coil-helix-coiled-coil-helix domain-containing protein 2, mitochondrial-like protein.
      
 0.589
mthfr
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
      
 0.555
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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