STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmtr2Adrift-type SAM-dependent 2'-O-MTase domain-containing protein. (763 aa)    
Predicted Functional Partners:
psme3ip1
Nefa_Nip30_N domain-containing protein.
      
 0.647
Rnmt
mRNA cap 0 methyltransferase domain-containing protein.
      
 0.631
rngtt
Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.
   
  
 0.593
cog4
Cog4 domain-containing protein.
      
 0.593
dxo
Protein Dom3Z-like protein.
      
 0.553
ust
Uncharacterized protein.
      
 0.553
Fam161b
Uncharacterized protein.
      
 0.552
gpatch2
G patch domain-containing protein 2.
      
 0.552
Smim7
Uncharacterized protein.
      
 0.446
ENSCMIP00000004830
Uncharacterized protein.
      
 0.434
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.