STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000010017Uncharacterized protein. (250 aa)    
Predicted Functional Partners:
vdac1
Uncharacterized protein.
  
0.872
ENSCMIP00000003208
Uncharacterized protein.
    
 0.804
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.776
tomm70
TPR_REGION domain-containing protein.
   
 0.748
ENSCMIP00000008840
Uncharacterized protein.
    
 0.710
ENSCMIP00000008653
Ubiquitin-like domain-containing protein.
    
 0.696
pink1
Protein kinase domain-containing protein.
    
 0.695
samm50
POTRA domain-containing protein.
   
 0.687
sqstm1
Uncharacterized protein.
   
 0.685
LOC103178513
Mitochondrial import receptor subunit TOM20-like protein.
   
 0.684
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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