STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abhd13AB hydrolase-1 domain-containing protein. (337 aa)    
Predicted Functional Partners:
igbp1
Uncharacterized protein.
      
 0.830
LOC103178632
AB hydrolase-1 domain-containing protein.
  
 
 0.698
rbmx
Heterogeneous nuclear ribonucleoprotein G-like protein.
    
 
 0.694
lyplal1
Abhydrolase_2 domain-containing protein.
     
 0.683
zdhhc24
Uncharacterized protein.
      
 0.656
mfap3
Ig-like domain-containing protein.
      
 0.653
zfand6
AN1-type zinc finger protein 6-like protein.
      
 0.616
lypla2
Abhydrolase_2 domain-containing protein.
     
 0.609
lypla1
Abhydrolase_2 domain-containing protein.
     
 0.609
sbspon
RPE-spondin-like protein.
      
 0.571
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (28%) [HD]