STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000010026Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
ENSCMIP00000011160
TACI-CRD2 domain-containing protein.
    
 0.984
ENSCMIP00000019683
TNFR-Cys domain-containing protein.
    
 0.975
csta
Cystatin B (Stefin B); Belongs to the cystatin family.
    
 
 0.905
aktip
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.897
LOC103178144
CD40 ligand-like protein; Belongs to the tumor necrosis factor family.
     
 0.767
map3k14
Protein kinase domain-containing protein.
     
 0.666
LOC103189936
Uncharacterized protein.
     
 0.666
traf5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.644
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.644
ENSCMIP00000008043
Uncharacterized protein.
    
   0.634
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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