STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctslCathepsin L; Belongs to the peptidase C1 family. (338 aa)    
Predicted Functional Partners:
Bcl2
BH4_2 domain-containing protein.
     
 0.902
bcl2l1
BH4_2 domain-containing protein.
     
 0.900
birc2
Uncharacterized protein.
     
 0.661
xiap
RING-type domain-containing protein.
     
  0.650
birc5
Uncharacterized protein.
     
  0.650
Aplnr
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.507
slc6a18
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.500
ctsb
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
   
 0.466
ENSCMIP00000001218
Propeptide_C1 domain-containing protein.
   
 0.466
ctso
Pept_C1 domain-containing protein; Belongs to the peptidase C1 family.
  
0.436
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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