LOC103173373 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

LOC103173373

Uncharacterized protein. (152 aa)

Predicted Functional Partners:

tes

0.592

rpf2

0.588

aspscr1

0.564

LOC103189767

0.445

lin54

0.445

LOC103175079

0.445

tom1l2

0.445

ENSCMIP00000027252

0.445

rgs18

0.418

alox5ap

0.404

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000027252	LOC103173373	ENSCMIP00000027252	ENSCMIP00000010064	VHS domain-containing protein.	Uncharacterized protein.	0.445
ENSCMIP00000027252	tom1l2	ENSCMIP00000027252	ENSCMIP00000027247	VHS domain-containing protein.	GAT domain-containing protein.	0.892
LOC103173373	ENSCMIP00000027252	ENSCMIP00000010064	ENSCMIP00000027252	Uncharacterized protein.	VHS domain-containing protein.	0.445
LOC103173373	LOC103175079	ENSCMIP00000010064	ENSCMIP00000027139	Uncharacterized protein.	CRC domain-containing protein.	0.445
LOC103173373	LOC103189767	ENSCMIP00000010064	ENSCMIP00000014053	Uncharacterized protein.	Uncharacterized protein; Belongs to the TOM1 family.	0.445
LOC103173373	alox5ap	ENSCMIP00000010064	ENSCMIP00000046927	Uncharacterized protein.	Uncharacterized protein.	0.404
LOC103173373	aspscr1	ENSCMIP00000010064	ENSCMIP00000048228	Uncharacterized protein.	UBX domain-containing protein.	0.564
LOC103173373	lin54	ENSCMIP00000010064	ENSCMIP00000018026	Uncharacterized protein.	CRC domain-containing protein.	0.445
LOC103173373	rgs18	ENSCMIP00000010064	ENSCMIP00000046079	Uncharacterized protein.	RGS domain-containing protein.	0.418
LOC103173373	rpf2	ENSCMIP00000010064	ENSCMIP00000037321	Uncharacterized protein.	Brix domain-containing protein.	0.588
LOC103173373	tes	ENSCMIP00000010064	ENSCMIP00000021533	Uncharacterized protein.	Uncharacterized protein.	0.592
LOC103173373	tom1l2	ENSCMIP00000010064	ENSCMIP00000027247	Uncharacterized protein.	GAT domain-containing protein.	0.445
LOC103175079	LOC103173373	ENSCMIP00000027139	ENSCMIP00000010064	CRC domain-containing protein.	Uncharacterized protein.	0.445
LOC103175079	lin54	ENSCMIP00000027139	ENSCMIP00000018026	CRC domain-containing protein.	CRC domain-containing protein.	0.902
LOC103189767	LOC103173373	ENSCMIP00000014053	ENSCMIP00000010064	Uncharacterized protein; Belongs to the TOM1 family.	Uncharacterized protein.	0.445
alox5ap	LOC103173373	ENSCMIP00000046927	ENSCMIP00000010064	Uncharacterized protein.	Uncharacterized protein.	0.404
aspscr1	LOC103173373	ENSCMIP00000048228	ENSCMIP00000010064	UBX domain-containing protein.	Uncharacterized protein.	0.564
aspscr1	rpf2	ENSCMIP00000048228	ENSCMIP00000037321	UBX domain-containing protein.	Brix domain-containing protein.	0.647
lin54	LOC103173373	ENSCMIP00000018026	ENSCMIP00000010064	CRC domain-containing protein.	Uncharacterized protein.	0.445
lin54	LOC103175079	ENSCMIP00000018026	ENSCMIP00000027139	CRC domain-containing protein.	CRC domain-containing protein.	0.902