STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173381Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
LOC103179651
Uncharacterized protein.
   
 
 0.866
pkp3
Uncharacterized protein.
   
 
 0.839
epha2
Uncharacterized protein.
      
 0.766
LOC103190064
Uncharacterized protein.
   
 
 0.766
ENSCMIP00000001553
Uncharacterized protein.
   
 
 0.711
Pkp1
Uncharacterized protein.
   
 
 0.711
pkp2
Uncharacterized protein.
   
 
 0.711
LOC103173715
Uncharacterized protein.
      
 0.692
apaf1
Uncharacterized protein.
      
 0.691
igfbp7
Ig-like domain-containing protein.
      
 0.679
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.