STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klf6Uncharacterized protein. (285 aa)    
Predicted Functional Partners:
sp1
Uncharacterized protein.
    
  0.933
klf7
Uncharacterized protein.
   
    0.787
e2f1
E2F_TDP domain-containing protein.
    
 
 0.706
aptx
HIT domain-containing protein.
      
 0.684
spata20
Thioredox_DsbH domain-containing protein.
      
 0.679
ccin
BTB domain-containing protein.
    
 0.677
ENSCMIP00000010502
Uncharacterized protein.
      
 0.674
nosip
Uncharacterized protein.
      
 0.671
atf3
BZIP domain-containing protein.
   
 0.668
scnn1b
Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.632
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.