STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
caluUncharacterized protein. (316 aa)    
Predicted Functional Partners:
fam20c
Fam20C domain-containing protein.
    
  0.644
LOC103191038
Fam20C domain-containing protein.
    
  0.644
s100z
Protein S100; Belongs to the S-100 family.
    
 
 0.591
rnf128
E3 ubiquitin-protein ligase RNF128-like protein.
      
 0.586
postn
Uncharacterized protein.
      
 0.586
ENSCMIP00000012693
Uncharacterized protein.
   
 
 0.548
LOC103182812
Calreticulin.
   
 
 0.548
calr3
Calreticulin.
   
 
 0.548
mnt
BHLH domain-containing protein.
      
 0.546
fam20a
Protein FAM20A-like protein.
     
  0.541
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.