Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc39a13Uncharacterized protein. (376 aa)    
Predicted Functional Partners:
ddx52
Uncharacterized protein.
      
 0.914
slc30a4
Uncharacterized protein.
   
 0.793
slc30a6
Uncharacterized protein.
   
 0.764
slc30a5
Uncharacterized protein.
   
 0.762
Slc30a1
Uncharacterized protein.
   
 0.718
Slc30a7
Uncharacterized protein.
   
 0.718
slc39a1
Uncharacterized protein.
   
 0.696
slc30a10
Zinc transporter 10.
   
 0.694
bms1
Bms1-type G domain-containing protein.
      
 0.691
slc39a11
Uncharacterized protein.
      
 0.677
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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