STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
xpnpep2Xaa-Pro aminopeptidase 2; Belongs to the peptidase M24B family. (677 aa)    
Predicted Functional Partners:
pitrm1
M16C_associated domain-containing protein.
   
 
 0.626
LOC103190253
Peptidase_M16_C domain-containing protein.
   
 
 0.626
fam104a
Uncharacterized protein.
      
 0.613
ENSCMIP00000006034
Uncharacterized protein.
   
 
 0.593
supt7l
STAGA complex 65 subunit gamma.
      
 0.589
prep
Uncharacterized protein.
  
 
 0.574
LOC103180816
AB hydrolase-1 domain-containing protein.
  
  
 0.569
LOC103177421
YrdC-like domain-containing protein.
    
  0.513
ntsr1
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.511
Bola3
Uncharacterized protein.
   
 
 0.508
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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