STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103190196Uncharacterized protein; Belongs to the transferrin family. (737 aa)    
Predicted Functional Partners:
LOC103173787
Uncharacterized protein.
  
 0.618
tfrc
Uncharacterized protein.
  
 0.618
thpo
Uncharacterized protein.
  
 0.618
tfr2
Uncharacterized protein.
  
 0.618
mis12
Uncharacterized protein.
    
   0.530
srprb
Uncharacterized protein.
 
      0.492
LOC103180816
AB hydrolase-1 domain-containing protein.
   
  
 0.485
LOC103183099
Alpha-1-microglobulin.
   
 
 0.474
LOC103177453
Uncharacterized protein.
      
 0.468
spg21
AB hydrolase-1 domain-containing protein.
      
 0.459
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.