STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103188189Casein kinase I isoform gamma-1; Belongs to the protein kinase superfamily. (423 aa)    
Predicted Functional Partners:
smo
Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.911
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
0.905
prkaca
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
0.905
cert1
Uncharacterized protein.
    
 0.680
ppp2r1a
Uncharacterized protein.
   
 0.477
gsk3b
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.460
vps41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.433
ppp4r1
WRNPLPNID domain-containing protein.
   
 
 0.420
LOC103191588
Uncharacterized protein.
   
 
 0.420
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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