STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103191509Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
ENSCMIP00000009919
Ig-like domain-containing protein.
 
      0.899
Nxph3
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.504
tafa2
Uncharacterized protein.
  
     0.502
nxph2
Uncharacterized protein.
  
     0.495
Nxph4
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.492
LOC103173006
Uncharacterized protein.
  
     0.474
mc4r
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
     0.469
ENSCMIP00000032104
Beta/gamma crystallin 'Greek key' domain-containing protein; Belongs to the beta/gamma-crystallin family.
  
     0.468
macc1
ZU5 domain-containing protein.
  
     0.468
ENSCMIP00000014323
Uncharacterized protein.
  
 
  0.448
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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