STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pygbAlpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (771 aa)    
Predicted Functional Partners:
agl
Uncharacterized protein.
  
 0.997
gbe1
Aamy domain-containing protein.
 
 0.997
ugp2
UTP--glucose-1-phosphate uridylyltransferase.
   
 
 0.976
LOC103174751
Alpha-amylase.
  
 0.966
pgm2
Uncharacterized protein.
  
 
 0.960
pgm2l1
Uncharacterized protein.
  
 
 0.960
phkg1
Protein kinase domain-containing protein.
   
 0.953
si
Uncharacterized protein.
    
 0.938
LOC103191064
Uncharacterized protein; Belongs to the calmodulin family.
   
  0.932
calml6
Uncharacterized protein.
   
 0.926
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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