STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc38a5Aa_trans domain-containing protein. (128 aa)    
Predicted Functional Partners:
LOC103177256
Uncharacterized protein.
   
 0.518
Lamtor2
Robl_LC7 domain-containing protein.
    
 0.512
Slc35a2
Uncharacterized protein.
      
 0.509
slc1a2
Amino acid transporter.
      
 0.416
slc1a1
Amino acid transporter.
      
 0.409
Fgf6
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
  
     0.402
ENSCMIP00000008261
Uncharacterized protein.
    
 0.401
ENSCMIP00000000490
B30.2/SPRY domain-containing protein.
  
     0.400
lamtor5
Hepatitis B virus X-interacting protein-like protein.
    
 0.400
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (28%) [HD]