cd2bp2 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

cd2bp2

Uncharacterized protein. (339 aa)

Predicted Functional Partners:

snrnp200

0.987

txnl4a

0.956

prpf8

0.943

prpf6

0.940

eftud2

0.910

txnl4b

0.855

tssc4

0.840

cd2

0.830

aar2

0.823

snrpe

0.737

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
aar2	cd2bp2	ENSCMIP00000037836	ENSCMIP00000010486	Uncharacterized protein.	Uncharacterized protein.	0.823
aar2	eftud2	ENSCMIP00000037836	ENSCMIP00000019319	Uncharacterized protein.	Tr-type G domain-containing protein.	0.964
aar2	prpf6	ENSCMIP00000037836	ENSCMIP00000028890	Uncharacterized protein.	Uncharacterized protein.	0.665
aar2	prpf8	ENSCMIP00000037836	ENSCMIP00000043521	Uncharacterized protein.	MPN domain-containing protein.	0.993
aar2	snrnp200	ENSCMIP00000037836	ENSCMIP00000022410	Uncharacterized protein.	Uncharacterized protein.	0.928
aar2	tssc4	ENSCMIP00000037836	ENSCMIP00000025552	Uncharacterized protein.	Tumor suppressing subtransferable candidate 4.	0.901
cd2	cd2bp2	ENSCMIP00000002040	ENSCMIP00000010486	Ig-like domain-containing protein.	Uncharacterized protein.	0.830
cd2bp2	aar2	ENSCMIP00000010486	ENSCMIP00000037836	Uncharacterized protein.	Uncharacterized protein.	0.823
cd2bp2	cd2	ENSCMIP00000010486	ENSCMIP00000002040	Uncharacterized protein.	Ig-like domain-containing protein.	0.830
cd2bp2	eftud2	ENSCMIP00000010486	ENSCMIP00000019319	Uncharacterized protein.	Tr-type G domain-containing protein.	0.910
cd2bp2	prpf6	ENSCMIP00000010486	ENSCMIP00000028890	Uncharacterized protein.	Uncharacterized protein.	0.940
cd2bp2	prpf8	ENSCMIP00000010486	ENSCMIP00000043521	Uncharacterized protein.	MPN domain-containing protein.	0.943
cd2bp2	snrnp200	ENSCMIP00000010486	ENSCMIP00000022410	Uncharacterized protein.	Uncharacterized protein.	0.987
cd2bp2	snrpe	ENSCMIP00000010486	ENSCMIP00000037778	Uncharacterized protein.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.737
cd2bp2	tssc4	ENSCMIP00000010486	ENSCMIP00000025552	Uncharacterized protein.	Tumor suppressing subtransferable candidate 4.	0.840
cd2bp2	txnl4a	ENSCMIP00000010486	ENSCMIP00000036132	Uncharacterized protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.956
cd2bp2	txnl4b	ENSCMIP00000010486	ENSCMIP00000047811	Uncharacterized protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.855
eftud2	aar2	ENSCMIP00000019319	ENSCMIP00000037836	Tr-type G domain-containing protein.	Uncharacterized protein.	0.964
eftud2	cd2bp2	ENSCMIP00000019319	ENSCMIP00000010486	Tr-type G domain-containing protein.	Uncharacterized protein.	0.910
eftud2	prpf6	ENSCMIP00000019319	ENSCMIP00000028890	Tr-type G domain-containing protein.	Uncharacterized protein.	0.999