cd2bp2 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene fusions

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[Homology]

Score

cd2bp2

Uncharacterized protein. (339 aa)

Predicted Functional Partners:

prpf8

0.990

txnl4a

0.987

snrnp40

0.980

cd2

0.979

eftud2

0.979

snrnp200

0.975

prpf6

0.972

eapp

0.965

ENSCMIP00000048806

0.965

aar2

0.964

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000048806	aar2	ENSCMIP00000048806	ENSCMIP00000037836	Sm domain-containing protein.	Uncharacterized protein.	0.572
ENSCMIP00000048806	cd2bp2	ENSCMIP00000048806	ENSCMIP00000010486	Sm domain-containing protein.	Uncharacterized protein.	0.965
ENSCMIP00000048806	eapp	ENSCMIP00000048806	ENSCMIP00000036652	Sm domain-containing protein.	Uncharacterized protein.	0.539
ENSCMIP00000048806	eftud2	ENSCMIP00000048806	ENSCMIP00000019319	Sm domain-containing protein.	Tr-type G domain-containing protein.	0.938
ENSCMIP00000048806	prpf6	ENSCMIP00000048806	ENSCMIP00000028890	Sm domain-containing protein.	Uncharacterized protein.	0.948
ENSCMIP00000048806	prpf8	ENSCMIP00000048806	ENSCMIP00000043521	Sm domain-containing protein.	MPN domain-containing protein.	0.978
ENSCMIP00000048806	snrnp200	ENSCMIP00000048806	ENSCMIP00000022410	Sm domain-containing protein.	Uncharacterized protein.	0.889
ENSCMIP00000048806	snrnp40	ENSCMIP00000048806	ENSCMIP00000042184	Sm domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.836
ENSCMIP00000048806	txnl4a	ENSCMIP00000048806	ENSCMIP00000036132	Sm domain-containing protein.	Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.	0.919
aar2	ENSCMIP00000048806	ENSCMIP00000037836	ENSCMIP00000048806	Uncharacterized protein.	Sm domain-containing protein.	0.572
aar2	cd2bp2	ENSCMIP00000037836	ENSCMIP00000010486	Uncharacterized protein.	Uncharacterized protein.	0.964
aar2	eapp	ENSCMIP00000037836	ENSCMIP00000036652	Uncharacterized protein.	Uncharacterized protein.	0.973
aar2	eftud2	ENSCMIP00000037836	ENSCMIP00000019319	Uncharacterized protein.	Tr-type G domain-containing protein.	0.987
aar2	prpf6	ENSCMIP00000037836	ENSCMIP00000028890	Uncharacterized protein.	Uncharacterized protein.	0.837
aar2	prpf8	ENSCMIP00000037836	ENSCMIP00000043521	Uncharacterized protein.	MPN domain-containing protein.	0.982
aar2	snrnp200	ENSCMIP00000037836	ENSCMIP00000022410	Uncharacterized protein.	Uncharacterized protein.	0.983
aar2	snrnp40	ENSCMIP00000037836	ENSCMIP00000042184	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.950
cd2	cd2bp2	ENSCMIP00000002040	ENSCMIP00000010486	Ig-like domain-containing protein.	Uncharacterized protein.	0.979
cd2bp2	ENSCMIP00000048806	ENSCMIP00000010486	ENSCMIP00000048806	Uncharacterized protein.	Sm domain-containing protein.	0.965
cd2bp2	aar2	ENSCMIP00000010486	ENSCMIP00000037836	Uncharacterized protein.	Uncharacterized protein.	0.964