lrrfip1 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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[Homology]

Score

lrrfip1

Uncharacterized protein. (1002 aa)

Predicted Functional Partners:

flii

0.875

ddx41

0.693

prkdc

0.652

tmod1

0.629

actr3

0.572

dhx9

0.553

tmod3

0.518

capzb

0.515

actl6a

0.496

dhx36

0.479

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
actl6a	flii	ENSCMIP00000005120	ENSCMIP00000019421	Actin-like 6A; Belongs to the actin family.	Uncharacterized protein.	0.606
actl6a	lrrfip1	ENSCMIP00000005120	ENSCMIP00000010498	Actin-like 6A; Belongs to the actin family.	Uncharacterized protein.	0.496
actr3	capzb	ENSCMIP00000016983	ENSCMIP00000000360	Uncharacterized protein; Belongs to the actin family.	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	0.962
actr3	lrrfip1	ENSCMIP00000016983	ENSCMIP00000010498	Uncharacterized protein; Belongs to the actin family.	Uncharacterized protein.	0.572
capzb	actr3	ENSCMIP00000000360	ENSCMIP00000016983	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein; Belongs to the actin family.	0.962
capzb	lrrfip1	ENSCMIP00000000360	ENSCMIP00000010498	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.515
capzb	tmod3	ENSCMIP00000000360	ENSCMIP00000047136	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	Uncharacterized protein.	0.469
ddx41	dhx36	ENSCMIP00000043646	ENSCMIP00000010540	Uncharacterized protein.	Uncharacterized protein.	0.773
ddx41	dhx9	ENSCMIP00000043646	ENSCMIP00000043145	Uncharacterized protein.	Uncharacterized protein.	0.841
ddx41	lrrfip1	ENSCMIP00000043646	ENSCMIP00000010498	Uncharacterized protein.	Uncharacterized protein.	0.693
dhx36	ddx41	ENSCMIP00000010540	ENSCMIP00000043646	Uncharacterized protein.	Uncharacterized protein.	0.773
dhx36	dhx9	ENSCMIP00000010540	ENSCMIP00000043145	Uncharacterized protein.	Uncharacterized protein.	0.684
dhx36	lrrfip1	ENSCMIP00000010540	ENSCMIP00000010498	Uncharacterized protein.	Uncharacterized protein.	0.479
dhx9	ddx41	ENSCMIP00000043145	ENSCMIP00000043646	Uncharacterized protein.	Uncharacterized protein.	0.841
dhx9	dhx36	ENSCMIP00000043145	ENSCMIP00000010540	Uncharacterized protein.	Uncharacterized protein.	0.684
dhx9	lrrfip1	ENSCMIP00000043145	ENSCMIP00000010498	Uncharacterized protein.	Uncharacterized protein.	0.553
dhx9	prkdc	ENSCMIP00000043145	ENSCMIP00000012639	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.611
flii	actl6a	ENSCMIP00000019421	ENSCMIP00000005120	Uncharacterized protein.	Actin-like 6A; Belongs to the actin family.	0.606
flii	lrrfip1	ENSCMIP00000019421	ENSCMIP00000010498	Uncharacterized protein.	Uncharacterized protein.	0.875
flii	tmod1	ENSCMIP00000019421	ENSCMIP00000016130	Uncharacterized protein.	Tropomodulin-1.	0.856