Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000010502Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
spata20
Thioredox_DsbH domain-containing protein.
      
 0.756
ccin
BTB domain-containing protein.
      
 0.746
spata18
MIEAP domain-containing protein.
      
 0.692
tspan8
Tetraspanin.
     
 0.681
klf6
Uncharacterized protein.
      
 0.674
scnn1b
Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.660
LOC103178515
Uncharacterized protein; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.627
itsn2
Uncharacterized protein.
     
 0.559
pomgnt2
Fibronectin type-III domain-containing protein.
   
  
 0.554
mpped2
Metallophos domain-containing protein.
      
 0.553
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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