STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pard3Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
LOC103185189
Uncharacterized protein.
 
     0.943
pard6b
Uncharacterized protein.
    
 0.927
pard6a
Uncharacterized protein.
    
 0.906
prkci
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.886
prkcz
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.849
pard6g
Uncharacterized protein.
    
 0.798
cdh5
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.687
tjp1
Uncharacterized protein; Belongs to the MAGUK family.
    
 
 0.615
cdc42
Cell division control protein 42-like protein.
    
 0.596
rps27a
Ubiquitin-like domain-containing protein.
    
  0.584
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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