STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103173507Cys_knot domain-containing protein. (124 aa)    
Predicted Functional Partners:
cga
Glycoprotein hormones alpha chain; Belongs to the glycoprotein hormones subunit alpha family.
   
 
 0.950
LOC103184536
Nuclear transport factor 2-like protein.
   
 0.735
LOC103176159
Fanconi_A_N domain-containing protein.
   
 0.735
LOC103176014
Fanconi_A_N domain-containing protein.
   
 0.735
nutf2
Nuclear transport factor 2-like protein.
   
 0.735
fos
Proto-oncogene c-Fos.
      
 0.641
gnrh2
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
      
 0.615
ENSCMIP00000039474
Uncharacterized protein.
      
 0.598
ENSCMIP00000035562
Uncharacterized protein.
   
 
 0.587
ENSCMIP00000005327
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
 0.586
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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