STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rangap1RanGAP1_C domain-containing protein. (521 aa)    
Predicted Functional Partners:
ube2i
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.999
ranbp2
Uncharacterized protein.
   
 0.998
rcc1
Regulator of chromosome condensation.
   
 0.993
ranbp1
RanBD1 domain-containing protein.
   
 0.992
sumo1
Small ubiquitin-related modifier.
    
 0.989
LOC103183812
Small ubiquitin-related modifier.
    
 0.989
ENSCMIP00000004712
RanBD1 domain-containing protein.
   
 0.982
nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.962
kpnb1
Importin N-terminal domain-containing protein.
   
 
 0.960
sumo2
Small ubiquitin-related modifier.
    
 0.944
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: medium (64%) [HD]