STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103191531BTB domain-containing protein. (595 aa)    
Predicted Functional Partners:
zfand4
Uncharacterized protein.
    
 0.551
ENSCMIP00000004712
RanBD1 domain-containing protein.
   
 0.539
ranbp2
Uncharacterized protein.
   
 0.539
mlnr
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
 0.459
dph3
DPH-type MB domain-containing protein.
    
 
 0.454
LOC103184088
VPS9 domain-containing protein.
    
 0.453
rabgef1
Rab5 GDP/GTP exchange factor-like protein.
    
 0.453
cdadc1
Uncharacterized protein.
 
 
  
 0.447
pter
Uncharacterized protein; Belongs to the metallo-dependent hydrolases superfamily. Phosphotriesterase family.
     
 0.445
adgrb1
Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.
    
 0.443
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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