trpm2 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

trpm2

Uncharacterized protein. (1332 aa)

Predicted Functional Partners:

arl8a

0.623

arl8b

0.623

trpa1

0.574

ENSCMIP00000034416

0.557

trpc5

0.538

trpc4

0.538

LOC103190825

0.528

mcoln3

0.528

mcoln2

0.528

itpr3

0.510

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000034416	trpm2	ENSCMIP00000034416	ENSCMIP00000010690	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	Uncharacterized protein.	0.557
LOC103190825	mcoln2	ENSCMIP00000009851	ENSCMIP00000017535	PKD_channel domain-containing protein.	PKD_channel domain-containing protein.	0.903
LOC103190825	mcoln3	ENSCMIP00000009851	ENSCMIP00000017411	PKD_channel domain-containing protein.	PKD_channel domain-containing protein.	0.902
LOC103190825	trpa1	ENSCMIP00000009851	ENSCMIP00000003697	PKD_channel domain-containing protein.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.532
LOC103190825	trpm2	ENSCMIP00000009851	ENSCMIP00000010690	PKD_channel domain-containing protein.	Uncharacterized protein.	0.528
arl8a	trpm2	ENSCMIP00000001700	ENSCMIP00000010690	Uncharacterized protein.	Uncharacterized protein.	0.623
arl8b	trpm2	ENSCMIP00000028131	ENSCMIP00000010690	ADP-ribosylation factor-like protein 8B-A; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein.	0.623
itpr3	trpm2	ENSCMIP00000002229	ENSCMIP00000010690	Uncharacterized protein.	Uncharacterized protein.	0.510
mcoln2	LOC103190825	ENSCMIP00000017535	ENSCMIP00000009851	PKD_channel domain-containing protein.	PKD_channel domain-containing protein.	0.903
mcoln2	mcoln3	ENSCMIP00000017535	ENSCMIP00000017411	PKD_channel domain-containing protein.	PKD_channel domain-containing protein.	0.903
mcoln2	trpa1	ENSCMIP00000017535	ENSCMIP00000003697	PKD_channel domain-containing protein.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.532
mcoln2	trpm2	ENSCMIP00000017535	ENSCMIP00000010690	PKD_channel domain-containing protein.	Uncharacterized protein.	0.528
mcoln3	LOC103190825	ENSCMIP00000017411	ENSCMIP00000009851	PKD_channel domain-containing protein.	PKD_channel domain-containing protein.	0.902
mcoln3	mcoln2	ENSCMIP00000017411	ENSCMIP00000017535	PKD_channel domain-containing protein.	PKD_channel domain-containing protein.	0.903
mcoln3	trpa1	ENSCMIP00000017411	ENSCMIP00000003697	PKD_channel domain-containing protein.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.532
mcoln3	trpm2	ENSCMIP00000017411	ENSCMIP00000010690	PKD_channel domain-containing protein.	Uncharacterized protein.	0.528
trpa1	LOC103190825	ENSCMIP00000003697	ENSCMIP00000009851	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	PKD_channel domain-containing protein.	0.532
trpa1	mcoln2	ENSCMIP00000003697	ENSCMIP00000017535	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	PKD_channel domain-containing protein.	0.532
trpa1	mcoln3	ENSCMIP00000003697	ENSCMIP00000017411	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	PKD_channel domain-containing protein.	0.532
trpa1	trpc4	ENSCMIP00000003697	ENSCMIP00000044969	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.	0.638