STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pip4k2bPhosphatidylinositol-5-phosphate 4-kinase type-2 beta-like protein. (414 aa)    
Predicted Functional Partners:
pip5k1c
PIPK domain-containing protein.
     
0.944
pip5k1b
PIPK domain-containing protein.
     
0.944
ENSCMIP00000009803
Phosphoinositide phospholipase C.
   
 0.924
plce1
Uncharacterized protein.
   
 0.923
pikfyve
Uncharacterized protein.
     
 0.920
Tmem55a
Phosphatidylinositol-4,5-bisphosphate 4-phosphatase; Catalyzes the hydrolysis of phosphatidylinositol-4,5- bisphosphate (PtdIns-4,5-P2) to phosphatidylinositol-4-phosphate (PtdIns-4-P).
     
 0.918
LOC103175665
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.917
pik3cg
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.917
pten
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
   
 0.915
mtmr3
Uncharacterized protein.
     
 0.914
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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