Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103179763Uncharacterized protein. (145 aa)    
Predicted Functional Partners:
cep89
Uncharacterized protein.
    
 
 0.901
LOC103185497
Uncharacterized protein.
      
 0.826
sclt1
Sodium channel and clathrin linker 1-like protein.
      
 0.794
ccdc150
Uncharacterized protein.
      
 0.782
cep83
Coiled-coil domain-containing protein 41.
      
 0.755
carnmt1
N2227 domain-containing protein.
      
 0.743
ccdc77
Coiled-coil domain-containing protein 77.
      
 0.692
lrrc45
Uncharacterized protein.
      
 0.689
znf367
Uncharacterized protein.
      
 0.663
mgme1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family.
      
 0.649
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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