Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
slc1a3Amino acid transporter. (507 aa)    
Predicted Functional Partners:
gpr22
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.661
rpl12
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
     
 0.567
slc6a14
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
  
 0.508
cs
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.486
slc7a5
Uncharacterized protein.
   
 
 0.475
glud1
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
      
 0.473
cldn19
Uncharacterized protein.
      
 0.469
me2
Malic enzyme.
  
  
 0.454
slc3a1
Aamy domain-containing protein.
   
 
 0.453
hmgcr
3-hydroxy-3-methylglutaryl coenzyme A reductase.
     
 0.432
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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