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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCMIP00000010764Uncharacterized protein. (363 aa)    
Predicted Functional Partners:
hfm1
Uncharacterized protein.
 
      0.868
B3gnt3
Hexosyltransferase.
   
 
 0.503
slc35c1
TPT domain-containing protein.
   
  
 0.451
tmem165
GDT1 family protein.
   
  
 0.433
St3gal5
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
      
 0.432
LOC103181797
Mannosyltransferase.
      
 0.430
unc50
Uncharacterized protein.
   
  
 0.410
gosr1
Uncharacterized protein.
      
 0.408
LOC103182093
MFS domain-containing protein.
 
 
  
 0.405
slc35b4
Uncharacterized protein.
      
 0.402
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.