Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103188191Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
ENSCMIP00000008017
Uncharacterized protein.
 
     0.926
LOC103172150
Uncharacterized protein.
 
    
0.911
ENSCMIP00000009972
Uncharacterized protein.
 
    
0.911
ENSCMIP00000021239
Uncharacterized protein.
 
    
0.911
LOC103172586
Uncharacterized protein.
 
    
0.909
ENSCMIP00000008906
Uncharacterized protein.
 
    
0.908
ENSCMIP00000008021
Uncharacterized protein.
 
    
0.907
ENSCMIP00000004895
Uncharacterized protein.
 
    
0.902
LOC103191098
EGF-like domain-containing protein.
 
      0.900
LOC103173120
Uncharacterized protein.
 
    
0.864
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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