pigf protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

pigf

Uncharacterized protein. (219 aa)

Predicted Functional Partners:

pigg

0.999

pigo

0.996

pigk

0.958

pigb

0.957

LOC103181797

0.957

pigt

0.945

pigs

0.924

gpaa1

0.921

pigu

0.914

alg13

0.889

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103181797	gpaa1	ENSCMIP00000019570	ENSCMIP00000004508	Mannosyltransferase.	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	0.587
LOC103181797	pigb	ENSCMIP00000019570	ENSCMIP00000018514	Mannosyltransferase.	Mannosyltransferase.	0.966
LOC103181797	pigf	ENSCMIP00000019570	ENSCMIP00000010776	Mannosyltransferase.	Uncharacterized protein.	0.957
LOC103181797	pigg	ENSCMIP00000019570	ENSCMIP00000038585	Mannosyltransferase.	Uncharacterized protein.	0.669
LOC103181797	pigk	ENSCMIP00000019570	ENSCMIP00000020934	Mannosyltransferase.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.674
LOC103181797	pigo	ENSCMIP00000019570	ENSCMIP00000020382	Mannosyltransferase.	Uncharacterized protein.	0.966
LOC103181797	pigt	ENSCMIP00000019570	ENSCMIP00000035324	Mannosyltransferase.	Uncharacterized protein.	0.445
alg13	pigf	ENSCMIP00000040009	ENSCMIP00000010776	Uncharacterized protein.	Uncharacterized protein.	0.889
gpaa1	LOC103181797	ENSCMIP00000004508	ENSCMIP00000019570	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Mannosyltransferase.	0.587
gpaa1	pigb	ENSCMIP00000004508	ENSCMIP00000018514	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Mannosyltransferase.	0.593
gpaa1	pigf	ENSCMIP00000004508	ENSCMIP00000010776	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.921
gpaa1	pigg	ENSCMIP00000004508	ENSCMIP00000038585	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.955
gpaa1	pigk	ENSCMIP00000004508	ENSCMIP00000020934	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.999
gpaa1	pigo	ENSCMIP00000004508	ENSCMIP00000020382	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.676
gpaa1	pigs	ENSCMIP00000004508	ENSCMIP00000030838	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.999
gpaa1	pigt	ENSCMIP00000004508	ENSCMIP00000035324	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.999
gpaa1	pigu	ENSCMIP00000004508	ENSCMIP00000026162	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Phosphatidylinositol glycan anchor biosynthesis class U protein.	0.999
pigb	LOC103181797	ENSCMIP00000018514	ENSCMIP00000019570	Mannosyltransferase.	Mannosyltransferase.	0.966
pigb	gpaa1	ENSCMIP00000018514	ENSCMIP00000004508	Mannosyltransferase.	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	0.593
pigb	pigf	ENSCMIP00000018514	ENSCMIP00000010776	Mannosyltransferase.	Uncharacterized protein.	0.957