pigf protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

pigf

Uncharacterized protein. (219 aa)

Predicted Functional Partners:

pigo

0.986

pigg

0.977

pigk

0.964

pigb

0.963

pigt

0.953

pigs

0.927

gpaa1

0.923

pigu

0.913

pign

0.806

LOC103181797

0.645

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103181797	gpaa1	ENSCMIP00000019570	ENSCMIP00000004508	Mannosyltransferase.	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	0.643
LOC103181797	pigb	ENSCMIP00000019570	ENSCMIP00000018514	Mannosyltransferase.	Mannosyltransferase.	0.662
LOC103181797	pigf	ENSCMIP00000019570	ENSCMIP00000010776	Mannosyltransferase.	Uncharacterized protein.	0.645
LOC103181797	pigg	ENSCMIP00000019570	ENSCMIP00000038585	Mannosyltransferase.	Uncharacterized protein.	0.595
LOC103181797	pigk	ENSCMIP00000019570	ENSCMIP00000020934	Mannosyltransferase.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.657
LOC103181797	pign	ENSCMIP00000019570	ENSCMIP00000035431	Mannosyltransferase.	Uncharacterized protein.	0.643
LOC103181797	pigo	ENSCMIP00000019570	ENSCMIP00000020382	Mannosyltransferase.	Uncharacterized protein.	0.658
LOC103181797	pigt	ENSCMIP00000019570	ENSCMIP00000035324	Mannosyltransferase.	Uncharacterized protein.	0.559
gpaa1	LOC103181797	ENSCMIP00000004508	ENSCMIP00000019570	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Mannosyltransferase.	0.643
gpaa1	pigb	ENSCMIP00000004508	ENSCMIP00000018514	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Mannosyltransferase.	0.662
gpaa1	pigf	ENSCMIP00000004508	ENSCMIP00000010776	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.923
gpaa1	pigg	ENSCMIP00000004508	ENSCMIP00000038585	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.443
gpaa1	pigk	ENSCMIP00000004508	ENSCMIP00000020934	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.	0.999
gpaa1	pigo	ENSCMIP00000004508	ENSCMIP00000020382	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.964
gpaa1	pigs	ENSCMIP00000004508	ENSCMIP00000030838	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.999
gpaa1	pigt	ENSCMIP00000004508	ENSCMIP00000035324	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Uncharacterized protein.	0.999
gpaa1	pigu	ENSCMIP00000004508	ENSCMIP00000026162	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	Phosphatidylinositol glycan anchor biosynthesis class U protein.	0.998
pigb	LOC103181797	ENSCMIP00000018514	ENSCMIP00000019570	Mannosyltransferase.	Mannosyltransferase.	0.662
pigb	gpaa1	ENSCMIP00000018514	ENSCMIP00000004508	Mannosyltransferase.	Glycosylphosphatidylinositol anchor attachment protein 1-like protein.	0.662
pigb	pigf	ENSCMIP00000018514	ENSCMIP00000010776	Mannosyltransferase.	Uncharacterized protein.	0.963