STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103190849Pribosyltran_N domain-containing protein. (398 aa)    
Predicted Functional Partners:
bckdhb
Transket_pyr domain-containing protein.
   
 0.839
pdhb
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.839
prps2
Pribosyltran_N domain-containing protein.
  
0.809
prps1
Phosphoribosyl pyrophosphate synthetase 1.
  
0.806
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.757
eprs1
Uncharacterized protein.
  
 
 0.755
h6pd
Uncharacterized protein.
  
 
 0.733
LOC103181687
PPC domain-containing protein.
  
  
 0.714
kars1
Lysine--tRNA ligase.
   
 
 0.692
yars1
Tyrosine--tRNA ligase.
  
 
 0.679
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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