STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103182008Phosphodiesterase. (849 aa)    
Predicted Functional Partners:
adk
PfkB domain-containing protein.
     
 0.919
ak3
GTP:AMP phosphotransferase AK3, mitochondrial; Involved in maintaining the homeostasis of cellular nucleotides by catalyzing the interconversion of nucleoside phosphates. Has GTP:AMP phosphotransferase and ITP:AMP phosphotransferase activities.
     
 0.908
LOC103182285
SMB domain-containing protein.
     
 0.906
LOC103182286
Uncharacterized protein.
     
 0.906
aprt
Pribosyltran domain-containing protein.
     
 0.902
ak8
Uncharacterized protein; Belongs to the adenylate kinase family.
     
 0.718
ak2
ADK_lid domain-containing protein; Belongs to the adenylate kinase family.
     
 0.718
nt5e
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
     
 0.684
LOC103177797
Uncharacterized protein; Belongs to the 5'-nucleotidase family.
     
 0.684
Ak9
Uncharacterized protein.
     
 0.663
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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