cdon protein (Callorhinchus milii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

cdon

Uncharacterized protein. (1283 aa)

Predicted Functional Partners:

LOC103173951

0.982

ihh

0.982

ptch2

0.981

ptch1

0.981

LOC103188247

0.949

gas1

0.943

ENSCMIP00000008565

0.901

ENSCMIP00000009378

0.830

ENSCMIP00000012051

0.830

ENSCMIP00000021562

0.830

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000008565	LOC103173951	ENSCMIP00000008565	ENSCMIP00000005693	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSCMIP00000008565	LOC103188247	ENSCMIP00000008565	ENSCMIP00000015763	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSCMIP00000008565	cdon	ENSCMIP00000008565	ENSCMIP00000010958	Uncharacterized protein.	Uncharacterized protein.	0.901
ENSCMIP00000008565	gas1	ENSCMIP00000008565	ENSCMIP00000009614	Uncharacterized protein.	Growth arrest-specific 1.	0.903
ENSCMIP00000008565	ihh	ENSCMIP00000008565	ENSCMIP00000033082	Uncharacterized protein.	Uncharacterized protein.	0.903
ENSCMIP00000008565	ptch1	ENSCMIP00000008565	ENSCMIP00000026259	Uncharacterized protein.	SSD domain-containing protein.	0.901
ENSCMIP00000008565	ptch2	ENSCMIP00000008565	ENSCMIP00000023906	Uncharacterized protein.	SSD domain-containing protein.	0.901
ENSCMIP00000009378	ENSCMIP00000012051	ENSCMIP00000009378	ENSCMIP00000012051	HH_signal domain-containing protein.	HH_signal domain-containing protein.	0.422
ENSCMIP00000009378	LOC103188247	ENSCMIP00000009378	ENSCMIP00000015763	HH_signal domain-containing protein.	Uncharacterized protein.	0.445
ENSCMIP00000009378	cdon	ENSCMIP00000009378	ENSCMIP00000010958	HH_signal domain-containing protein.	Uncharacterized protein.	0.830
ENSCMIP00000009378	gas1	ENSCMIP00000009378	ENSCMIP00000009614	HH_signal domain-containing protein.	Growth arrest-specific 1.	0.465
ENSCMIP00000009378	ptch1	ENSCMIP00000009378	ENSCMIP00000026259	HH_signal domain-containing protein.	SSD domain-containing protein.	0.791
ENSCMIP00000009378	ptch2	ENSCMIP00000009378	ENSCMIP00000023906	HH_signal domain-containing protein.	SSD domain-containing protein.	0.791
ENSCMIP00000012051	ENSCMIP00000009378	ENSCMIP00000012051	ENSCMIP00000009378	HH_signal domain-containing protein.	HH_signal domain-containing protein.	0.422
ENSCMIP00000012051	LOC103173951	ENSCMIP00000012051	ENSCMIP00000005693	HH_signal domain-containing protein.	Uncharacterized protein.	0.839
ENSCMIP00000012051	LOC103188247	ENSCMIP00000012051	ENSCMIP00000015763	HH_signal domain-containing protein.	Uncharacterized protein.	0.445
ENSCMIP00000012051	cdon	ENSCMIP00000012051	ENSCMIP00000010958	HH_signal domain-containing protein.	Uncharacterized protein.	0.830
ENSCMIP00000012051	gas1	ENSCMIP00000012051	ENSCMIP00000009614	HH_signal domain-containing protein.	Growth arrest-specific 1.	0.465
ENSCMIP00000012051	ptch1	ENSCMIP00000012051	ENSCMIP00000026259	HH_signal domain-containing protein.	SSD domain-containing protein.	0.791
ENSCMIP00000012051	ptch2	ENSCMIP00000012051	ENSCMIP00000023906	HH_signal domain-containing protein.	SSD domain-containing protein.	0.791