STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
eif4g3Uncharacterized protein. (1507 aa)    
Predicted Functional Partners:
eif4e1b
Eukaryotic translation initiation factor 4E-like protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.927
LOC103182130
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.927
ncbp1
MIF4G domain-containing protein.
   
 0.920
ncbp2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.906
LOC103182199
Eukaryotic translation initiation factor 4E family member 1c; Belongs to the eukaryotic initiation factor 4E family.
   
 0.898
eif4b
RRM domain-containing protein.
   
 0.891
eif4a3
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.853
eif4e3
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.839
eif5
Eukaryotic translation initiation factor 5-like protein.
   
 0.825
eif4g2
Uncharacterized protein.
   
0.790
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.