LOC103190212 protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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gene fusions

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[Homology]

Score

LOC103190212

Uncharacterized protein. (728 aa)

Predicted Functional Partners:

ebi3

0.990

LOC103177817

0.978

LOC103189107

0.614

LOC103184883

0.612

ENSCMIP00000009013

0.602

LOC103181975

0.602

jak1

0.602

tyk2

0.602

jak2

0.602

stat3

0.588

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCMIP00000009013	LOC103177817	ENSCMIP00000009013	ENSCMIP00000047158	FERM domain-containing protein.	Uncharacterized protein.	0.758
ENSCMIP00000009013	LOC103190212	ENSCMIP00000009013	ENSCMIP00000011237	FERM domain-containing protein.	Uncharacterized protein.	0.602
ENSCMIP00000009013	stat3	ENSCMIP00000009013	ENSCMIP00000006620	FERM domain-containing protein.	Signal transducer and activator of transcription.	0.709
LOC103177817	ENSCMIP00000009013	ENSCMIP00000047158	ENSCMIP00000009013	Uncharacterized protein.	FERM domain-containing protein.	0.758
LOC103177817	LOC103181975	ENSCMIP00000047158	ENSCMIP00000009502	Uncharacterized protein.	Tyrosine-protein kinase.	0.758
LOC103177817	LOC103184883	ENSCMIP00000047158	ENSCMIP00000016160	Uncharacterized protein.	Uncharacterized protein.	0.491
LOC103177817	LOC103190212	ENSCMIP00000047158	ENSCMIP00000011237	Uncharacterized protein.	Uncharacterized protein.	0.978
LOC103177817	ebi3	ENSCMIP00000047158	ENSCMIP00000045333	Uncharacterized protein.	Uncharacterized protein.	0.985
LOC103177817	jak1	ENSCMIP00000047158	ENSCMIP00000035724	Uncharacterized protein.	Tyrosine-protein kinase.	0.758
LOC103177817	jak2	ENSCMIP00000047158	ENSCMIP00000043079	Uncharacterized protein.	Tyrosine-protein kinase.	0.758
LOC103177817	stat3	ENSCMIP00000047158	ENSCMIP00000006620	Uncharacterized protein.	Signal transducer and activator of transcription.	0.589
LOC103177817	tyk2	ENSCMIP00000047158	ENSCMIP00000039454	Uncharacterized protein.	Tyrosine-protein kinase.	0.758
LOC103181975	LOC103177817	ENSCMIP00000009502	ENSCMIP00000047158	Tyrosine-protein kinase.	Uncharacterized protein.	0.758
LOC103181975	LOC103190212	ENSCMIP00000009502	ENSCMIP00000011237	Tyrosine-protein kinase.	Uncharacterized protein.	0.602
LOC103181975	jak1	ENSCMIP00000009502	ENSCMIP00000035724	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.900
LOC103181975	jak2	ENSCMIP00000009502	ENSCMIP00000043079	Tyrosine-protein kinase.	Tyrosine-protein kinase.	0.901
LOC103181975	stat3	ENSCMIP00000009502	ENSCMIP00000006620	Tyrosine-protein kinase.	Signal transducer and activator of transcription.	0.973
LOC103184883	LOC103177817	ENSCMIP00000016160	ENSCMIP00000047158	Uncharacterized protein.	Uncharacterized protein.	0.491
LOC103184883	LOC103190212	ENSCMIP00000016160	ENSCMIP00000011237	Uncharacterized protein.	Uncharacterized protein.	0.612
LOC103189107	LOC103190212	ENSCMIP00000047288	ENSCMIP00000011237	Uncharacterized protein.	Uncharacterized protein.	0.614