galm protein (Callorhinchus milii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

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Experiments

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Textmining

[Homology]

Score

galm

Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (341 aa)

Predicted Functional Partners:

galk1

0.998

galt

0.975

gale

0.969

galk2

0.969

glb1

0.927

LOC103190172

0.910

LOC103190177

0.910

LOC103190178

0.910

LOC103190173

0.910

LOC103190174

0.910

Your Current Organism:

Callorhinchus milii

NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103190172	LOC103190173	ENSCMIP00000002339	ENSCMIP00000007197	Uncharacterized protein.	Uncharacterized protein.	0.606
LOC103190172	LOC103190174	ENSCMIP00000002339	ENSCMIP00000008180	Uncharacterized protein.	Uncharacterized protein.	0.607
LOC103190172	LOC103190177	ENSCMIP00000002339	ENSCMIP00000002582	Uncharacterized protein.	Uncharacterized protein.	0.603
LOC103190172	LOC103190178	ENSCMIP00000002339	ENSCMIP00000004086	Uncharacterized protein.	Uncharacterized protein.	0.603
LOC103190172	galm	ENSCMIP00000002339	ENSCMIP00000011306	Uncharacterized protein.	Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.	0.910
LOC103190172	glb1	ENSCMIP00000002339	ENSCMIP00000033356	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	0.900
LOC103190173	LOC103190172	ENSCMIP00000007197	ENSCMIP00000002339	Uncharacterized protein.	Uncharacterized protein.	0.606
LOC103190173	LOC103190174	ENSCMIP00000007197	ENSCMIP00000008180	Uncharacterized protein.	Uncharacterized protein.	0.607
LOC103190173	LOC103190177	ENSCMIP00000007197	ENSCMIP00000002582	Uncharacterized protein.	Uncharacterized protein.	0.606
LOC103190173	LOC103190178	ENSCMIP00000007197	ENSCMIP00000004086	Uncharacterized protein.	Uncharacterized protein.	0.606
LOC103190173	galm	ENSCMIP00000007197	ENSCMIP00000011306	Uncharacterized protein.	Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.	0.910
LOC103190173	glb1	ENSCMIP00000007197	ENSCMIP00000033356	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	0.900
LOC103190174	LOC103190172	ENSCMIP00000008180	ENSCMIP00000002339	Uncharacterized protein.	Uncharacterized protein.	0.607
LOC103190174	LOC103190173	ENSCMIP00000008180	ENSCMIP00000007197	Uncharacterized protein.	Uncharacterized protein.	0.607
LOC103190174	LOC103190177	ENSCMIP00000008180	ENSCMIP00000002582	Uncharacterized protein.	Uncharacterized protein.	0.607
LOC103190174	LOC103190178	ENSCMIP00000008180	ENSCMIP00000004086	Uncharacterized protein.	Uncharacterized protein.	0.607
LOC103190174	galm	ENSCMIP00000008180	ENSCMIP00000011306	Uncharacterized protein.	Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.	0.910
LOC103190174	glb1	ENSCMIP00000008180	ENSCMIP00000033356	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.	0.900
LOC103190177	LOC103190172	ENSCMIP00000002582	ENSCMIP00000002339	Uncharacterized protein.	Uncharacterized protein.	0.603
LOC103190177	LOC103190173	ENSCMIP00000002582	ENSCMIP00000007197	Uncharacterized protein.	Uncharacterized protein.	0.606