STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acp5Tartrate-resistant acid phosphatase type 5. (329 aa)    
Predicted Functional Partners:
acp1
LMWPc domain-containing protein.
    
 0.918
ENSCMIP00000031053
Flavokinase domain-containing protein.
  
 
 0.916
blvrb
NAD(P)-bd_dom domain-containing protein.
     
  0.911
LOC103174792
Tartrate-resistant acid phosphatase type 5.
  
  
 
0.902
LOC103182285
SMB domain-containing protein.
    
 0.901
LOC103182286
Uncharacterized protein.
    
 0.901
lcat
Uncharacterized protein.
      
 0.661
nfatc1
RHD domain-containing protein.
      
 0.638
CYTB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex) that is part of the mitochondrial respiratory chain. The b-c1 complex mediates electron transfer from ubiquinol to cytochrome c. Contributes to the generation of a proton gradient across the mitochondrial membrane that is then used for ATP synthesis.
      
 0.636
nudt12
Uncharacterized protein.
   
 0.623
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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