Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
aldh4a1Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (898 aa)    
Predicted Functional Partners:
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
 
 0.941
ENSCMIP00000002648
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.801
LOC103190733
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.801
ENSCMIP00000009575
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.801
ENSCMIP00000010715
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.801
glud1
ELFV_dehydrog domain-containing protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.763
nphp3
TPR_REGION domain-containing protein.
   
 
 0.748
oat
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.734
gtpbp2
Tr-type G domain-containing protein.
   
  
 0.727
LOC103188743
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.717
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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