STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankef1ANK_REP_REGION domain-containing protein. (752 aa)    
Predicted Functional Partners:
rsph6a
Uncharacterized protein.
   
    0.593
wdr38
WD_REPEATS_REGION domain-containing protein.
   
  0.577
rsph14
Rhabdoid tumor deletion region protein 1.
   
   0.575
tekt3
Uncharacterized protein.
   
   0.572
cfap99
Uncharacterized protein.
   
  0.571
tsnaxip1
TSNAXIP1_N domain-containing protein.
   
  0.570
fbxo36
F-box only protein 36.
   
 
  0.542
ccdc65
NYD-SP28 domain-containing protein.
   
    0.535
gak
Uncharacterized protein.
    
 0.479
LOC103175281
Uncharacterized protein.
      
 0.465
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.