STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
timm13zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (58 aa)    
Predicted Functional Partners:
Timm8a
zf-Tim10_DDP domain-containing protein; Belongs to the small Tim family.
   
 0.997
Timm10
zf-Tim10_DDP domain-containing protein.
   
 0.992
LOC103187065
zf-Tim10_DDP domain-containing protein.
   
 0.988
timm9
Mitochondrial import inner membrane translocase subunit Tim9.
   
 0.985
timm23
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.963
chchd4
Mitochondrial intermembrane space import and assembly protein 40-A.
   
 0.936
pdyn
Uncharacterized protein.
    
   0.919
parl
Rhomboid domain-containing protein.
      
 0.900
ENSCMIP00000030023
Uncharacterized protein.
   
 0.900
ndufa8
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  
 0.879
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
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