STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neproDUF4477 domain-containing protein. (537 aa)    
Predicted Functional Partners:
eif2s2
eIF2B_5 domain-containing protein.
      
 0.591
pop4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
   0.570
stox2
Stork_head domain-containing protein.
      
 0.550
ENSCMIP00000021112
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
      
 0.549
rpp30
Ribonuclease P protein subunit p30.
    
   0.549
maip1
Uncharacterized protein.
      
 0.548
Rpp25
Alba domain-containing protein.
    
   0.545
ENSCMIP00000000656
Uncharacterized protein.
      
 0.474
rpp25l
Alba-like protein C9orf23.
    
   0.422
LOC103172681
Flavodoxin-like domain-containing protein.
   
  
 0.413
Your Current Organism:
Callorhinchus milii
NCBI taxonomy Id: 7868
Other names: Australian ghost shark, C. milii, elephant fish, elephant shark, ghost shark, makorepe, plownose chimaera, reperepe
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.